BioGateway: a semantic systems biology tool for the life sciences
نویسندگان
چکیده
منابع مشابه
Structuring the Life Science Resourceome for Semantic Systems Biology: Lessons from the BioGateway Project
The application of Semantic Web technologies in the life sciences for data integration is still nascent. We have recently built BioGateway, an RDF store that integrates all the candidate OBO Foundry ontologies with other resources such as SWISS-PROT. In the course of developing BioGateway, we faced challenges that are common to other projects that involve large datasets in diverse formats. We p...
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The China-UK Systems Biology Workshop 2005 was held during June 20–21 in the National Science Park of Zhejiang University, Hangzhou, China. It was organized by the Institute of Bioinformatics, Zhejiang University, and was initiated by Prof. Dr. Jun Zhu (Zhejiang University) and Prof. Dr. John Findlay (University of Leeds, UK). The workshop was part of the program called UK-China Partners in Sci...
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The Semantic Web is a vision for the next generation of the Web [1]. The Web is a huge interlinked information resource, but is largely restricted to human use because the information is represented only in natural language. The goal of the Semantic Web is to make these data – the facts on the Web – amenable to computational processing. To date, the Semantic Web has largely been pushed by techn...
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Life science research is becoming evermore computationally intensive. Hence, from a computational resource perspective, Grid computing provides a logical approach to meeting many of the computational needs of life science research. However, there are several barriers to the widespread use of Grid computing in life sciences. In this paper, we attempt to address one particular barrier: the diffic...
متن کاملBioGateway: Integrated RDF for Life Science Queries
Life science researchers have been in need for integrated knowledge systems for decades and even more so in recent years. BioGateway is a knowledge base that demonstrates the application of Semantic Web technologies in the domain of Life Sciences: it provides URIs for the data, connected by RDF triples. Unlike other systems it has RDF optimised for querying and it provides a single click access...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2009
ISSN: 1471-2105
DOI: 10.1186/1471-2105-10-s10-s11